Surface-confined metal–organic frameworks (2D MOFs) provide a versatile platform for studying low-dimensional coordination chemistry and tunable molecular architectures at atomic and molecular levels. Here, we investigate the self-assembly of 4,4-bipyridine and Fe on Au(111) and reveal a coverage-dependent phase behavior governed by metal–ligand coordination and surface availability. In the absence of Fe, 4,4-bipyridine forms a weakly substrate-coupled molecular network stabilized by intermolecular interactions. Fe coordination induces a sequence of distinct two-dimensional architectures, ranging from dense three-fold-coordinated tripod networks to open Kagome lattices composed of hexagonally arranged metal centers bridged by molecular linkers. Using scanning probe microscopy, low-energy electron diffraction, and density-functional theory calculations, we identify three thermodynamically stable phases with different coordination numbers, symmetries, and molecular densities. Transformations between these phases are reversible and controlled by the Fe-to-ligand ratio. These findings demonstrate how subtle control over coordination chemistry and surface coverage enables programmable structural transitions in two-dimensional metal–organic frameworks.




