2506000783
  • Open Access
  • Review
Review and Outlook for Research and Development in Aquatic Life and Ecosystems
  • Jianguang Qin 1, *,   
  • Zhenhua Ma 2,   
  • Yan Li 1

Received: 20 May 2025 | Revised: 11 Jun 2025 | Accepted: 17 Jun 2025 | Published: 20 Jun 2025

Abstract

Aquatic life and ecosystems represent some of the most dynamic and biologically diverse components of the biosphere. It is vital in global biogeochemical cycles, food security, climate regulation, and ecosystem services. This review provides a comprehensive synthesis of current knowledge and emerging research areas in studying aquatic life and ecosystems for freshwater and marine environments. This paper uses a chronological approach to explore the research development in the past, present, and future. We traced the research advances in structural and functional diversity of aquatic organisms, from microbial communities to higher trophic levels, and examined the intricate ecological interactions underpinning ecosystem stability and productivity. We grasped key topics to reflect research progress and advancement in habitat degradation, pollution, climate change, and biological invasions, particularly aquatic biodiversity and ecological integrity. In the new century, scientists have applied genomic tools for ecological management and microbiome research to enhance our understanding of aquatic systems at the molecular level and explore underlying mechanisms. Applied research has emphasized conservation and management, including ecosystem-based management, aquaculture, and fisheries. By critically analyzing past developments and current knowledge gaps, this review paper provides readers with future research priorities and sustainable management of aquatic life and ecosystems in an era of rapid environmental change. 

References 

  • 1.
    Wang, J.J.; Soininen, J.; Heino, J. Ecological indicators for aquatic biodiversity, ecosystem functions, human activities and climate change. Ecol. Indic. 2021, 132, 108250.
  • 2.
    Huang, L.; Meng, J.-N.; Xu, F.L.; et al. A holistic view of aquatic ecosystems: Integrating health and integrity, network, stability, and regime shift assessments. Internat. J. Sediment Res. 2024, 39, 1–14.
  • 3.
    Soininen, J.; Bartels, P.; Heino, J.; et al. Toward more integrated ecosystem research in aquatic and terrestrial environments. BioScience 2015, 65, 147–182.
  • 4.
    Egerton, F.N. A history of the ecological sciences, part 23: Linnaeus and the economy of nature. Bull. Ecol. Soc. Am. 2007, 88, 72–88.
  • 5.
    Lindeman, R.L. The trophic-dynamic aspect of ecology. Ecology 1942, 23, 399–418.
  • 6.
    Odum, E.P. Fundamentals of Ecology; W.B. Saunders Cy.: Philadelphia, PA, USA; London, UK, 1953.
  • 7.
    Beddall, B.G. Wallace, Darwin, and the Theory of Natural Selection. J. Hist. Biol. 1968, 1, 261–323.
  • 8.
    Slack, N.G.G. Evelyn Hutchinson and the Invention of Modern Ecology; Yale University Press: New Haven, CT, USA, 2011; 461p.
  • 9.
    Lehman, J.T. Good Professor Edmondson. Limnol. Oceanogr. 1988, 33, 1234–1240.
  • 10.
    Inman, D. Scripps in the 1940s: The Sverdrup Era. Oceanography 2003, 16, 20–28.
  • 11.
    Zaret, T.M. Predation and Freshwater Communities; Yale Press: New Haven, CT, USA, 1980; 208p.
  • 12.
    Meyers, D.G. Trophic Interactions within Aquatic Ecosystems; Routledge: London, UK, 1985.
  • 13.
    Kerfoot, W.C.; Shi, A. Predation: Direct and Indirect Impact on Aquatic Communities; University Press of New England: Lebanon, NH, USA, 1987; 386p.
  • 14.
    Schindler, D. Eutrophication and recovery in experimental lakes: Implications for lake management. Science 1974, 184, 897–899.
  • 15.
    Moss, B. The Norfolk Broadland: Experiments in the restoration of a complex wetland. Biol. Rev. 1983, 58, 521–561.
  • 16.
    Wetzel, R.G. Limnology: Lake and River Ecosystems, 3rd ed.; Academic Press: San Diego, CA, USA, 2001.
  • 17.
    Cooper, D.J.; Watson, A.J.; Nightingale, P.D. Large decrease in ocean—Surface CO2 fugacity in response to in situ iron fertilization. Nature 1996, 383, 511–513.
  • 18.
    Cosgrove, W.J.; Loucks, D.P. Water management: Current and future challenges and research directions. Water Resour. Res. 2015, 51, 4823–4839.
  • 19.
    Goel, P.K. Water Pollution: Causes, Effects and Control, 2nd ed.; New Age International: New Delhi, India, 2006.
  • 20.
    Carpenter, S.R. Phosphorus control is critical to mitigating eutrophication. Proc. Natl. Acad. Sci. USA 2008, 105, 11039–11040.
  • 21.
    Munro, G.R. The optimal management of transboundary renewable resources. Can. J. Econ. 1979, 12, 355–376.
  • 22.
    Stickney, R.R. Principles of Aquaculture; Wiley: Hoboken, NJ, USA, 1994; 520p.
  • 23.
    Ricker, W.E. Computation and Interpretation of Biological Statistics of Fish Populations; Bulletin of the Fisheries Research Board of Canada, Ottawa, ON, Canada, 1975.
  • 24.
    Pillay, T. Aquaculture: Principle and Practice; John Wiley and Sons: Hoboken, NJ, USA, 1993; 600p.
  • 25.
    Slocombe, D.S. Implementing ecosystem-based management. BioScience 1993, 43, 612–622.
  • 26.
    Levin, S.A.; Lubchenco, J. Resilience, robustness, and marine ecosystem-based management. BioScience 2008, 58, 27–32.
  • 27.
    Venegas, R.M.; Acevedo, J.; Treml, J.A. Three decades of ocean warming impacts on marine ecosystems: A review and perspective. Deep-Sea Res. Deep. Sea Res. Part II Top. Stud. Oceanogr. 2023, 212, 105318.
  • 28.
    Jiang, L.-Q.; Carter, B.R.; Feely, R.A.; et al. Surface ocean pH and buffer capacity: Past, present and future. Sci. Rep. 2019, 9, 18624.
  • 29.
    Capon, S.J.; Stewart-Koster, B.; Bunn, S.E. Future of freshwater ecosystems in a 1.5 °C warmer world. Front. Environ. Sci. 2021, 9, 784642.
  • 30.
    Nordlund, L.M.; Gullström, M. Biodiversity loss in seagrass meadows due to local invertebrate fisheries and harbour activities. Estuar. Coast. Shelf Sci. 2013, 135, 231–240.
  • 31.
    Ditzel, P.; König, S.; Musembi, P.; et al. Correlation between coral reef condition and the diversity and abundance of fishes and sea urchins on an East African coral reef. Ocean 2022, 3, 1–14.
  • 32.
    Faghihinia, M.; Xu, Y.; Liu, D.; et al. Freshwater biodiversity at different habitats: Research hotspots with persistent and emerging themes. Ecol. Indic. 2021, 129, 107926.
  • 33.
    Sierp, M.T.; Qin, J.G.; Recknagel, F. Biomanipulation: A review of biological control measures in eutrophic waters and the potential for Murray cod Maccullochella peelii peelii to promote water quality in temperate Australia. Rev. Fish Biol. Fish. 2009, 19, 143–165.
  • 34.
    Mustafa, G.; Hussain, S.; Liu, Y.H.; et al. Microbiology of wetlands and the carbon cycle in coastal wetland mediated by microorganisms. Sci. Total Environ. 2024, 954, 175734.
  • 35.
    Dang, H.Y. Grand challenges in microbe-driven marine carbon cycling research. Front. Microbiol. 2020, 11, 1039.
  • 36.
    Fenchel, T. The microbial loop—25 years later. J. Exp. Mar. Biol. Eco. 2008, 366, 99–103.
  • 37.
    Shimizu, N.; Aoki, T.; Hirono, I.; et al. Aquatic Genomics: Steps towards a Great Future; Springer: Tokyo, Japan, 2003; 432p.
  • 38.
    Nam, N.N.; Do, H.D.K.; Trinh, K.T.L.; et al. Metagenomics: An effective approach for exploring microbial diversity and functions. Foods 2023, 12, 2140.
  • 39.
    Misman, N.A.; Sharif, M.F.; Chowdhury, A.J.K.; et al. Water pollution and the assessment of water quality parameters: A review. Desalin. Water Treat. 2023, 294, 79–88.
  • 40.
    Kumar, R.; Qureshi, M.; Vishwakarma, D.K.; et al. A review on emerging water contaminants and the application of sustainable removal technologies. Case Studies Chem. Environ. Eng. 2022, 6, 100219.
  • 41.
    Alberghini, L.; Truant, A.; Santonicola, S.; et al. Microplastics in Fish and Fishery Products and Risks for Human Health: A Review. Int. J. Environ. Res. Public Health 2023, 20, 789.
  • 42.
    Yu, M.X.; Wood, P.; van de Giesen, N.; et al. Enhanced potential ecological risk induced by a large-scale water diversion project. Stoch. Environ. Res. Risk Assess. 2020, 34, 2125–2138.
  • 43.
    Wang, H.; Xia, Z.Q.; Li, S.G.; et al. What’s coming eventually comes: A follow-up on an invader’s spread by the world’s largest water diversion in China. Biol. Invit. 2023, 25, 1–5.
  • 44.
    Qin, J.G. Oyster: Physiology, Ecological Distribution and Mortality; Nova Science Publishers: New York, NY, USA, 2012; 311p.
  • 45.
    Ma, Z.H.; Qin, J.G. New Technology in Marine Aquaculture; MDPI: Basel, Switzerland, 2023; 308p.
  • 46.
    Abbass, K.; Qasim, M.Z.; Song, H.M.; et al. A review of the global climate change impacts, adaptation, and sustainable mitigation measures. Environ Sci Pollut Res Int. 2022, 29, 42539–42559.
  • 47.
    Miya, M. Environmental DNA metabarcoding: A novel method for biodiversity monitoring of marine fish communities. Annu. Rev. Mar. Sci. 2022, 14, 161–185.
  • 48.
    Behera, B.K.; Dehury, B.; Rout, A.K.; et al. Metagenomics study in aquatic resource management: Recent trends, applied methodologies and future needs. Gene Rep. 2021, 25, 101372.
  • 49.
    Grey, A.; Costeira, R.; Lorenzo, E.; et al. Biogeochemical properties of blue carbon sediments influence the distribution and monomer composition of bacterial polyhydroxyalkanoates (PHA). Biogeochemistry 2023, 162, 359–380.
  • 50.
    Li, X.Y.; Shen, X.J.; Jiang, W.W.; et al. Comprehensive review of emerging contaminants: Detection technologies, environmental impact, and management strategies. Ecotoxicol. Environ. Saf. 2022, 29, 2060–2070.
  • 51.
    Waylen, K.A.; Wilkinson, M.E.; Blackstock, K.L.; et al. Nature-based solutions and restoration are intertwined but not identical: Highlighting implications for societies and ecosystems. Nat. Sol. 2024, 5, 100116.
  • 52.
    Feng, J.C.; Liang, J.Z.; Cai, Y.P.; et al. Deep-sea organisms research oriented by deep-sea technologies development. Sci. Bull. 2022, 67, 1802–1816.
  • 53.
    Chen, G.; Huang, B.X.; Chen, X.Y.; et al. Deep blue AI: A new bridge from data to knowledge for the ocean science. Deep Sea Res. Deep. Sea Res. Part I Oceanogr. Res. Pap. 2022, 190, 103886.
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Qin, J.; Ma, Z.; Li, Y. Review and Outlook for Research and Development in Aquatic Life and Ecosystems. Aquatic Life and Ecosystems 2025. https://doi.org/10.53941/ale.2025.100002.
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